org.catacomb.numeric.mesh

Class Discretizer

java.lang.Object

org.catacomb.numeric.mesh.Discretizer

public abstract class Discretizer
extends java.lang.Object

Constructor Summary

Constructors

Constructor and Description
Discretizer()

Method Summary

Methods

Modifier and Type	Method and Description
static MeshPoint[]	discretize(MeshPoint[] pt, double disqrtr, int maxnpt) divided into segments with equal integral of the square root of the radius, given by disqrtr.
static double	distanceBetween(MeshPoint cp, MeshPoint cq)
static double[]	getSubdivision(MeshPoint cpa, MeshPoint cpb, double disqrtr)
static void	locateBetween(MeshPoint cpa, MeshPoint cpb, double f, MeshPoint cpn)
static MeshPoint[]	merge(MeshPoint[] pt, double maxdr, double maxlen, double tol)
static void	movePerp(MeshPoint ca, MeshPoint cb, double dperp, MeshPoint cm)
static void	recMerge(MeshPoint cp, double maxdr, double maxlen, double tol)
static void	Sp(java.lang.String s)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

Discretizer

public Discretizer()

Method Detail

discretize

public static MeshPoint[] discretize(MeshPoint[] pt,
                     double disqrtr,
                     int maxnpt)

divided into segments with equal integral of the square root of the radius, given by disqrtr. This balances the charging rate of points in the final discretization and its definition is independent of the electrical properties of the membrane. It provides a more consistent discretization than the electrotonic length, and is valid in the absence of persistent currents. Tapering segments are treated as such and not approximated by a series of cylinders. The discretization does, however, respect the actual points of the structure to which clamps or recorders may be attached.

locateBetween

public static void locateBetween(MeshPoint cpa,
                 MeshPoint cpb,
                 double f,
                 MeshPoint cpn)

distanceBetween

public static double distanceBetween(MeshPoint cp,
                     MeshPoint cq)

movePerp

public static void movePerp(MeshPoint ca,
            MeshPoint cb,
            double dperp,
            MeshPoint cm)

merge

public static MeshPoint[] merge(MeshPoint[] pt,
                double maxdr,
                double maxlen,
                double tol)

recMerge

public static void recMerge(MeshPoint cp,
            double maxdr,
            double maxlen,
            double tol)

getSubdivision

public static double[] getSubdivision(MeshPoint cpa,
                      MeshPoint cpb,
                      double disqrtr)

Sp

public static void Sp(java.lang.String s)